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GoldenGate Software Inc goldengate methylation array
Goldengate Methylation Array, supplied by GoldenGate Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/goldengate+methylation+array/goldengate+methylation+array/pmc02836370-104-3-2
Average 90 stars, based on 1 article reviews
goldengate methylation array - by Bioz Stars, 2026-10
90/100 stars

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Methylation:

Article Title: DNA methylation profiling across the spectrum of HPV-associated anal squamous neoplasia.
Article Snippet: .. Our findings confirm previous reports of high concordance between GoldenGate methylation array technology and conventional methylation assays [20,21]. ..

Article Title: Statistical challenges in analyzing methylation and long-range chromosomal interaction data
Article Snippet: Since 2006, Illumina has produced increasingly dense methylation arrays. .. The GoldenGate methylation array covered 1,536 CpG sites, selected for their proximity to cancer-relevant genes [ 7 ]. .. The Infinium HumanMethylation27 BeadChip array covered 27,578 CpG sites selected to be in or near the promoter regions and CpG islands associated with 14,495 genes [ 8 ].

Article Title: Aberrant DNA methylation of microRNA genes in human breast cancer - a critical appraisal.
Article Snippet: Aberrant DNA methylation of regulatory sequences is a well-documented mechanism of functional deletion of genes with anti-tumourigenic properties including microRNAs.. This review discusses the publications describing aberrant methylation of microRNA genes in human breast cancer cells.. Among the anti-tumourigenic properties of epigenetically inactivated microRNA genes, the inhibition of proliferation and of epithelial-to-mesenchymal transition (EMT) are the best studied.

Article Title: Stability of genomic imprinting and gestational-age dynamic methylation in complicated pregnancies conceived following assisted reproductive technologies.
Article Snippet: We thank all members of the Illumina and Sequenom custom genotype facilities for their help and guidance in assay design. .. We are especially grateful to Tais Moreno-Mella at the CEGEN Human Genotyping Unit for performing the Goldengate methylation array hybridizations and Valeria Romanelli for help with pyrosequencing. ..

Article Title: Recursively partitioned mixture model clustering of DNA methylation data using biologically informed correlation structures.
Article Snippet: To gain an understanding of the robustness of the proposed methodology to array type and to provide insight regarding clustering performance and consistency across multiple methylation data sets, we considered array-based methylation data sets that were acquired using both the Illumina GoldenGate and the Infinium Human Methylation27 array technologies. .. As previously described, the GoldenGate methylation array simultaneously profiles the methylation status of over 1500 CpG loci, associated with approximately 800 cancer related genes, whereas the Infinium Human Methylation27 methylation array assesses the methylation status of over 27,000 CpG loci, associated with approximately 14,000 genes. ..

Article Title: DNA Methylation Profiling across the Spectrum of HPV-Associated Anal Squamous Neoplasia
Article Snippet: .. Our findings confirm previous reports of high concordance between GoldenGate methylation array technology and conventional methylation assays , . ..

Article Title: Genetic and Epigenetic Somatic Alterations in Head and Neck Squamous Cell Carcinomas Are Globally Coordinated but Not Locally Targeted
Article Snippet: .. As the GoldenGate methylation array investigates nearly 800 cancer-involving genes and is enriched for tumor suppressor-associated loci, we were uniquely positioned to investigate just this question. ..

Article Title: DNA Methylation in Multiple Myeloma Is Weakly Associated with Gene Transcription
Article Snippet: .. Based on the genes of the GoldenGate methylation array, our data suggests that DNA methylation in MM is, therefore, not strongly associated with gene expression. .. We then examined if the 31 correlated loci were specifically associated with CpG islands or non-CpG islands by examining the average distance to transcriptional start site (TSS) as per the annotation of probes on the GoldenGate array.

DNA Methylation Assay:

Article Title: DNA Methylation in Multiple Myeloma Is Weakly Associated with Gene Transcription
Article Snippet: .. Based on the genes of the GoldenGate methylation array, our data suggests that DNA methylation in MM is, therefore, not strongly associated with gene expression. .. We then examined if the 31 correlated loci were specifically associated with CpG islands or non-CpG islands by examining the average distance to transcriptional start site (TSS) as per the annotation of probes on the GoldenGate array.

Gene Expression:

Article Title: DNA Methylation in Multiple Myeloma Is Weakly Associated with Gene Transcription
Article Snippet: .. Based on the genes of the GoldenGate methylation array, our data suggests that DNA methylation in MM is, therefore, not strongly associated with gene expression. .. We then examined if the 31 correlated loci were specifically associated with CpG islands or non-CpG islands by examining the average distance to transcriptional start site (TSS) as per the annotation of probes on the GoldenGate array.



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